Open Menu Close Menu Open Search Close Search

Use the drop down to browse publications by month.


Jessica Babb (Nephew Lab)
Babb JA, Masini CV, Day HE, Campeau S. (2013) Stessor-specific effects of sex on HPA axis hormones and activation of stress-related neurocircuitry. Stress. 16(6): 664-77.

Jerome Clasadonte (Haydon Lab)

  • Clasadonte J, Dong J, Hines DJ, Haydon PG. (2013) Astrocyte control of synaptic NMDA receptors contributes to the progressive development of temporal lobe epilepsy. Proc Natl Acad Sci U S A. 110(43):17540-5.
  • Clasadonte J*, McIver S*, Schmitt L*, Halassa MM, Haydon PG. (2014) Chronic sleep restriction disrupts sleep homeostasis and behavioral sensitivity to alcohol by reducing the extracellular accumulation of adenosine. J Neurosci. [In Press.] *Co-authors.

Michael Darcy (Feig Lab)
Darcy MJ, Trouche S, Jin SX, Feig LA. (2013) Age-dependent role for ras-GRF1 in the late stages of adult neurogenesis in the dentate gyrus. Hippocampus. [Epub ahead of print]

Michael Lustgarten (Fielding Lab)
Lustgarten MS, Price LL, Phillips EM, Fielding RA. (2013) Serum Glycine Is Associated with Regional Body Fat and Insulin Resistance in Functionally-Limited Older Adults. PLoS One. 8(12): e84034.

Mathilde Romagnoli (G Sonenshein Lab)
Romagnoli M, Mineva ND, Polmear M, Conrad C, Srinivasan S, Loussouarn D, Barillé-Nion S, Georgakoudi I, Dagg A, McDermott EW, Duffy MJ, McGowan PM, Schlomann U, Parsons M, Bartsch JW, Sonenshein GE. (2013) ADAM8 expression in invasive breast cancer promotes tumor dissemination and metastasis. EMBO Mol Med. [Epub ahead of print]

Junpeng Wang (Meydani Lab)

  • Du X*, Wang J*, Niu X, Smith D, Wu D, Meydani SN. (2013) Dietary Wolfberry Supplementation Enhances the Protective Effect of Flu Vaccine against Influenza Challenge in Aged Mice. J Nutr. [Epub ahead of print] *equal contribution.
  • Wang J, Niu X, Du X, Smith D, Meydani SN, Wu D. (2014) Dietary supplementation with white button mushrooms augments the protective immune response to salmonella vaccine in mice. J Nutr. 144(1):98-105. Epub 2013 Nov 20.

Jessica Babb (Nephew Lab)
Babb JA, Masini CV, Day HE, Campeau S. (2013) Stressor-specific effects of sex on HPA axis hormones and activation of stress-related neurocircuitry. Stress. (6):664-77. doi: 10.3109/10253890.2013.840282.

Kerstin Birke (Kumar-Singh Lab)

  • Birke K, Lipo E, Birke MT, Kumar-Singh R. (2013) Topical Application of PPADS Inhibits Complement Activation and Choroidal Neovascularization in a Model of Age-Related Macular Degeneration. PLoS One. 8(10):e76766. doi: 10.1371/journal.pone.0076766.
  • Yu AL, Birke K, Burger J, Welge-Lussen U. (2012) Biological effects of cigarette smoke in cultured human retinal pigment epithelial cells. PLoS One. 7(11):e48501. doi: 10.1371/journal.pone.0048501.

Michael Lustgarten (Fielding Lab)
Lustgarten MS, Price LL, Phillips EM, Fielding RA. (2013) Branched Chain Amino Acids are Associated with Muscle Mass in Functionally-Limited Older Adults. Journals of Gerontology Series A: Medical Sciences. J Gerontol A Biol Sci Med Sci. [Epub ahead of print]

Kate O’Toole (Maguire Lab)
O’Toole KK, Hooper A, Wakefield S, and Maguire JL. (2013) Seizure-induced disinhibition of the HPA axis increases seizure susceptibility. Epilepsy Research [In Press]

Olena Tokareva (Kaplan Lab)

  • Tokareva O, Jacobsen M, Buehler M, Wong J, Kaplan DL. (2013) Structure-function-property-design interplay in biopolymers: Spider silk. Acta Biomater. [Epub ahead of print]
  • Tokareva O, Michalczechen-Lacerda VA, Rech EL, Kaplan DL. (2013) Recombinant DNA production of spider silk proteins. Microbial Biotechnology, 6(6): 651–663.

Maxim Dokukin (Sokolov Lab)

  • Dokukin ME, NV Guz, and I Sokolov. (2013) Quantitative study of the elastic modulus of loosely attached cells in AFM indentation experiments. Biophysical journal. 104(10): p. 2123-2131.
  • Sokolov I, ME Dokukin, and NV Guz. (2013) Method for quantitative measurements of the elastic modulus of biological cells in AFM indentation experiments. Methods. 60(2): p. 202-213.

Michael Lustgarten (Fielding Lab)

  • Lustgarten MS, Price LL, Phillips EM, Kirn D, Mills J, Fielding RA. Serum Predictors of Percent Lean Mass in Young Adults. J Strength Cond Res. 2013 Jun 14. [Epub ahead of print]
  • Lustgarten MS, Price LL, Phillips EM, Fielding RA. Branched Chain Amino Acids are Associated with Muscle Mass in Functionally-Limited Older Adults. Journals of Gerontology Series A: Medical Sciences (Accepted, not yet in print)

Jenny Maki (Degterev Lab)
Thapa RJ, Nogusa S, Chen P, Maki JL, Lerro A, Andrake M, Rall GF, Degterev A, Balachandran S. (2013) Interferon-induced RIP1/RIP3-mediated necrosis requires PKR and is licensed by FADD and caspases. Proc Natl Acad Sci. Aug 13; 110(33):E3109-18.

Laura Schaevitz (Berger-Sweeney Lab)
Schaevitz LR, Gómez NB, Zhen DP and Berger-Sweeney JE. (2013) MeCP2 R168X male and female mutant mice exhibit Rett-like behavioral deficits. Genes, Brain, and Behavior. DOI: 10.1111/gbb.12070.

Lucas Albrechet-Souza (Miczek Lab)

  • Reis FMC, Albrechet-Souza L, Franci CR, Brandao ML. (2012) Risk assessment behaviors associated with corticosterone trigger the defense reaction to social isolation in rats: Role of the anterior cingulate cortex. Stress. 15(3): 318-328.
  • Almada RC, Albrechet-Souza L, Brandao ML. (2013) Further evidence for involvement of the dorsal hippocampus serotonergic and -aminobutyric acid (GABA)ergic pathways in the expression of contextual fear conditioning in rats. Journal of Psychopharmacology. xx: 1-9.
  • Borelli KG, Albrechet-Souza L, Fedoce AG, Fabri DS, Resstel LB, Brandao ML. (2013) Conditioned fear is modulated by CRF mechanisms in the periaqueductal gray columns. Hormones and Behavior. 63: 791-799.
  • Albrechet-Souza L, Carvalho MC, Brandao ML. (2013) D1-like receptors in the nucleus accumbens shell regulate the expression of contextual fear conditioning and activity of the anterior cingulate cortex in rats. International Journal of Neuropsychopharmacology. 16: 1045-1057.

Laura Vanderburg (Levin Lab)

  • Vandenberg LN, Morrie RD, Seebohm G, Lemire JM, Levin M. (2013) Rab GTPases are required for early orientation of the left-right axis in Xenopus. Mechanisms of Development. 130: 254-271. [selected for journal cover]
  • Vandenberg LN, Schaeberle CM, Rubin BS, Sonnenschein C, Soto AM. (2013) The male mammary gland: a target for the xenoestrogen bisphenol A. Reproductive Toxicology. 37: 15-23.
  • Vandenberg LN, Colborn T, Hayes T, Heindel JJ, Jacobs D, Lee DH, Myers JP, Shioda T, Soto AM, vom Saal FS, Welshons WV, Zoeller RT. (2013) Regulatory decisions on endocrine disrupting chemicals should be based on the principles of endocrinology. Reproductive Toxicology. 38: 1-15.
  • Vandenberg LN, Hunt PA, Myers JP, vom Saal FS. (2013) Human exposures to bisphenol A: mismatches between data and assumptions. Reviews on Environmental Health. 28(1): 37-58.
  • Vandenberg LN, Levin M. (2013) A unified model for left-right asymmetry? Comparison and synthesis of molecular models of embryonic laterality. Developmental Biology. 379(1): 1-15. [selected for journal cover]

Kendall Walker (Tesco Lab)
Walker KR and Tesco G. (2013) Molecular mechanisms of cognitive dysfunction following traumatic brain injury. Frontiers in Aging Neuroscience. Jul 9:5:29.

Huifen Wang (Jacques Lab)

  • Wang H, Jacques PF. (2013) Yogurt and weight and management. Am J Clin Nutr. [In press]
  • Wang H, Jacobs DR, Gaffo AL, Gross, MD, Goff DC, Carr JJ. (2013) Serum urate and subclinical atherosclerosis: The Coronary Artery Risk Development in Young Adults (CARDIA) study. J Intern Med. [Epub ahead of print]

Cuixian Yang (Yi Lab)
Yang C, Choi C-H, Lee C-S, and Yi H. (2013) A Facile Synthesis-Fabrication Strategy for Integration of Catalytically Active Viral-Palladium Nanostructures into Polymeric Hydrogel Microparticles via Replica Molding. ACS Nano. 7 (6): 5032-5044.


Trent Fowler (Roy Lab)
Fowler T, Suh H, Buratowski S, Roy AL. (2013) Regulation of primary response genes in B cells. J Biol Chem. 2013 May 24; 288(21):14906-16. doi: 10.1074/jbc.M113.454355. Epub 2013 Mar 27.

Jenny Maki (Degterev Lab)
Book Chapter:
Jenny L Maki and Alexei Degterev. (June, 2013) Activity Assays for Receptor Interacting Protein Kinase 1: A Key Regulator of Necroptosis. Methods in Molecular Biology, Necrosis Vol 1004. Editors: Kimberly McCall and Charles Klein. Humana Press.

Mael Manesse (Walt Lab)

  • Palacios MA, Lacy MM, Schubert SM, Manesse M and Walt DR. (2013) Assessing the Stochastic Intermittency of Single Quantum Dot Luminescence for Robust Quantification of Biomolecules. Anal Chem. 2013 May 24. [Epub ahead of print]
  • Manesse M, Phillips AF, Lafratta CN, Palacios MA, Hayman RB and Walt DR. (2013) Dynamic microbead arrays for biosensing applications. Lab Chip, 13(11): 2153–60. doi: 10.1039/c3lc00044c.

Erika Pearson (Moore Lab)
Pearson EL, Moore CL. (2013) Dismantling promoter-driven RNA polymerase II transcription complexes in vitro by the termination factor Rat1. J Biol Chem. 2013 May 20. [Epub ahead of print]

Kyle Quinn (Georgakoudi Lab)

  • Quinn KP and Georgakoudi I. (2013) Rapid quantification of pixel-wise fiber orientation data in micrographs. J. Biomed. Opt. 18(4), 046003. doi: 10.1117/1.JBO.18.4.046003.
  • Speroni L, Whitt GS, Xylas J, Quinn KP, Jondeau-Cabaton A, Barnes C, Georgakoudi I, Sonnenschein C, Soto AM. (2013) Hormonal regulation of epithelial organization in a three-dimensional breast tissue culture model. Tissue Eng Part C Methods. 2013 May 16 [Epub ahead of print]
  • Ward A, Quinn KP, Bellas E, Georgakoudi I, Kaplan DL. (2013) Noninvasive Metabolic Imaging of Engineered 3D Human Adipose Tissue in a Perfusion Bioreactor. PLoS ONE 8(2): e55696. doi: 10.1371/journal.pone.0055696. Epub 2013 Feb 6.

Roshni Rainbow (Zeng Lab)
Rainbow RS, Kwon H, Foote AT, Preda RC, Kaplan DL, Zeng L. (2013) Muscle cell-derived factors inhibit inflammatory stimuli-induced damage in hMSC-derived chondrocytes. Osteoarthritis and Cartilage. 2013 Apr 20. pii: S1063-4584(13)00771-1. doi: 10.1016/j.joca.2013.04.011. [Epub ahead of print]

Lucia Speroni (Soto & Sonnenschein Lab)
Speroni L, Whitt GS, Xylas J, Quinn KP, Jondeau-Cabaton A, Barnes C, Georgakoudi I, Sonnenschein C, Soto AM. (2013) Hormonal regulation of epithelial organization in a three-dimensional breast tissue culture model. Tissue Eng Part C Methods. 2013 May 16. [Epub ahead of print]

Lorien Urban (Roberts Lab)
Urban LE, Lichtenstein AH, Gary CE, Fierstein JL, Equi A, Kussmaul C, Dallal GE, Roberts SB. (2013) The energy content of restaurant foods without stated calorie information. JAMA Internal Med. 2013 May 13:1-8. doi: 10.1001/jamainternmed.2013.6163. [Epub ahead of print]

Rohini Vishwanathan (Tang Lab)

  • Vishwanathan R, Chung M, Johnson EJ. (2013) A systematic review on zinc for the prevention and treatment of age-related macular degeneration. Invest Ophthalmol Vis Sci. 2013 May 7. pii: iovs.12-11552v1. doi: 10.1167/iovs.12-11552. [Epub ahead of print].
  • Johnson EJ, Vishwanathan R (co-first author), Johnson MA, Hausman DB et al. (2013) Relationship between serum and brain carotenoids, α-tocopherol and retinol concentrations and cognitive performance in the oldest old from the Georgia Centenarian Study (accepted J of Aging Research).

Huifen Wang (Jacques Lab)

  • Oude Griep LM, Wang H, Chan Q. (2013) Empirically derived dietary patterns, diet quality scores, and markers of inflammation and endothelial dysfunction. Curr Nutr Rep. Apr. 2013; 2:97-104.
  • Wang H, Rogers GT, Fox CS, Meigs JB, Jacques PF. (2013) Dairy intake and longitudinal changes of body weight and waist circumference: the Framingham Heart Study (FHS). Int J Obes. May. 2013 [In press]

Junpeng Wang (Meydani Lab)
Wang J, Vanegas SM, Du X, Noble T, Zingg JM, Meydani M, Meydani SN, Wu D. (2013) Caloric restriction favorably impacts metabolic and immune/inflammatory profiles in obese mice but curcumin/piperine consumption adds no further benefit. Nutr Metab (Lond). 2013 Mar 27;10(1):29. doi: 10.1186/1743-7075-10-29.


Aleksandra Kristo (Lichtenstein Lab)
Kristo AS, Matthan NR, and Lichtenstein AH. (2013) Effect of Diets Differing in Glycemic Index and Glycemic Load on Cardiovascular Risk Factors: Review of Randomized Controlled-Feeding Trials.Nutrients, 5(4), 1071-1080.

Daniel Lobo (Levin Lab)

  • Lobo D, Malone TJ, Levin M. (2013) Planform: an application and database of graph-encoded planarian regenerative experiments. Bioinformatics (in press).
  • Lobo D., Malone T.J., Levin M. (2013) Towards a bioinformatics of patterning: a computational approach to understanding regulative morphogenesis. Biology Open, 2(2), pp. 156-169 (cover).
  • Lobikin M., Chernet B., Lobo D., Levin M. (2012) Resting potential, oncogene-induced tumorigenesis, and metastasis: the bioelectric basis of cancer in vivo. Physical Biology 9(6): 065002 (cover).

Jenny Maki (Degterev Lab)

  • Xie T, Peng W, Liu Y, Yan C, Maki J, Degterev A, Yuan J, Shi Y. (2013) Structural Basis of RIP1 Inhibition by Necrostatins. Structure. 21(3):493-9.
  • Maki JL, Tres Brazell J, Teng X, Cuny GD, Degterev A. (2013) Expression and purification of active receptor interacting protein 1 kinase using a baculovirus system. Protein Expr Purif. pii: S1046-5928(13)00047-8. [Epub ahead of print]

Kosh Neupane (Kritzer Lab)
Neupane KP, Aldous AR, Kritzer JA. (2013) Macrocyclization of the ATCUN Motif Controls Metal Binding and Catalysis. Inorg. Chem. 52 (5), pp 2729–2735.

Anna Osherov (Panzer Lab)
Osherov A, Zhu C, and Panzer MJ. (2013) Role of Solution Chemistry in Determining the Morphology and Photoconductivity of Electrodeposited Cuprous Oxide Films Chem. Mater., 25 (5), pp 692–698.

Roshni Rainbow (Zeng Lab)

  • Kwon H, Sun L, Cairns D, Rainbow R, Preda C, Kaplan D, Zeng L. (2013) The influence of scaffold material on chondrocytes under inflammatory conditions. Acta Biomaterialia, Epub.
  • Rainbow R, Zeng L, Ren W. (2012) Impact of neighboring tissues on cartilage repair and inflammation in osteoarthritis: implications on therapeutics approaches. Arthritis, Epub.

Maria Van Rompay (Tucker Lab)
Van Rompay MI, McKeown NM, Castaneda-Sceppa C, Ordovás JM, Tucker KL. (2013) Carbohydrate nutrition differs by diabetes status and is associated with dyslipidemia in Boston Puerto Rican adults without diabetes. J Nutr.;143(2):182-8.


Wendy Scott Beane (Levin Lab)
Beane WS, Morokuma J, Lemire JM, Levin M. Bioelectric signaling regulates head and organ size during planarian regeneration. Development 2013 Jan 15; 140(2):313-22.

Laurent Bouillant (L. Sononshein Lab)

  • Bouillaut L, Self WT, Sonenshein AL. Proline-Dependent Regulation of Clostridium difficile Stickland Metabolism. J Bacteriol. 2013 Feb; 195(4):844-54. doi: 10.1128/JB.01492-12. Epub 2012 Dec 7.
  • Babakhani F, Bouillaut L, Sears P, Sims C, Gomez A, Sonenshein AL. Fidaxomicin inhibits toxin production in Clostridium difficile. J Antimicrob Chemother. 2012 Dec 2. [Epub ahead of print]
  • Liu H, Bouillaut L, Sonenshein AL, Melville SB. Use of a Mariner-Based Transposon Mutagenesis System To Isolate Clostridium perfringens Mutants Deficient in Gliding Motility. J Bacteriol. 2013 Feb; 195(3):629-36. doi: 10.1128/JB.01288-12. Epub 2012 Nov 30.
  • Babakhani F, Bouillaut L, Gomez A, Sears P, Nguyen L, Sonenshein AL. Fidaxomicin inhibits spore production in Clostridium difficile. Clin Infect Dis. 2012 Aug; 55 Suppl 2:S162-9. doi: 10.1093/cid/cis453.

Andrew Burke (Miczek Lab)
Burke AR, Forster GL, Novick AM, Roberts CL, Watt MJ. Effects of adolescent social defeat on adult amphetamine-induced locomotion and corticoaccumbal dopamine release in male rats. Neuropharmacology. 2013 Apr; 67:359-69. doi: 10.1016/j.neuropharm.2012.11.013. Epub 2012 Dec 6.

Huifen Wang (Jacques Lab)
Wang H, Livingston KA, Fox CS, Meigs JB, Jacques PF. Yogurt consumption is associated with better diet quality and metabolic profile in American men and women. Nutrition Research. 2013 Jan; 33(1):18-26. doi:

Fair Vassoler (Byrnes Lab)
Vassoler FM, White SL, Schmidt HD, Sadri-Vakili G, Pierce RC. Epigenetic inheritance of a cocaine-resistance phenotype. Nature Neuroscience. 2013 Jan; 16(1):42-7. doi: 10.1038/nn.3280. Epub 2012 Dec 16.

Rohini Vishwanathan (Tang Lab)
Vishwanathan R and Johnson EJ. Eggs: Friend or Foe? Journal of Postdoctoral Research 2013; 1 (1): 70-84.

Yue Wu (Noonan Lab)
Wu Y, Tracey B, Natarjan P, Noonan JP. James Stein Type Center Pixel Weights for Non-Local Means Image Denoising. IEEE Signal Processing Letters. [In press]